BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D01LP1|AL430525
(941 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig154 965 0.0
3x_Contig982 304 3e-82
>3x_Contig154
Length = 778
Score = 965 bits (486), Expect = 0.0
Identities = 488/490 (99%)
Strand = Plus / Minus
Query: 452 tacagagatgttatggctcctgggttttggttagctgagggtggtcaatcatgcacaggt 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tacagagatgttatggctcctgggttttggttagctgagggtggtcaatcatgcacaggt 719
Query: 512 gcattattagcccacgttttaactacccatccagcatacgccgagctttctcaactttca 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gcattattagcccacgttttaactacccatccagcatacgccgagctttctcaactttca 659
Query: 572 gatgcagcaaacgtctctaagttcgattatttaaattcaagattagagctattggctcaa 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gatgcagcaaacgtctctaagttcgattatttaaattcaagattagagctattggctcaa 599
Query: 632 cagcgcaaagctagctccgttgttgcattggccaagcatctattcttttacggtgattat 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cagcgcaaagctagctccgttgttgcattggccaagcatctattcttttacggtgattat 539
Query: 692 catgggaatagatctccaatcgctgatccatctatgcgtgccgctatcattggtcaatct 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 catgggaatagatctccaatcgctgatccatctatgcgtgccgctatcattggtcaatct 479
Query: 752 atggacaactctatcgatgatctatccataatgtatttgggagcttgtgaattcattgca 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 atggacaactctatcgatgatctatccataatgtatttgggagcttgtgaattcattgca 419
Query: 812 caacaaacgagacaaattgtcgagcaaatgtgtwattcaggacatgaattagctgccatc 871
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 418 caacaaacgagacaaattgtcgagcaaatgtgtaattcaggacatgaattagctgccatc 359
Query: 872 ttcatgtcaggaggacaatgcagaaatgggttattaatgagattgttggcagactgtacc 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttcatgtcaggaggacaatgcagaaatgggttattaatgagattgttggcagactgtacc 299
Query: 932 ggtttacmaa 941
||||||| ||
Sbjct: 298 ggtttaccaa 289
>3x_Contig982
Length = 3343
Score = 304 bits (153), Expect = 3e-82
Identities = 160/161 (99%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 1 gatcagatcctactgttctaccgtttgtaagcaaggtctattgccacttggagtagaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gatcagatcctactgttctaccgtttgtaagcaaggtctattgccacttggagtagaagg 104
Query: 61 atctaagaacggttggtctaaagagttcttacaagaaataggattggaagagttgattgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atctaagaacggttggtctaaagagttcttacaagaaataggattggaagagttgattgc 44
Query: 121 agatgattttgccaagcttggtggttcagtaacagaaacca 161
|||||||||||||||||||||||| ||||||||||||||||
Sbjct: 43 agatgattttgccaagcttggtgg-tcagtaacagaaacca 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5076
Number of Sequences: 1807
Number of extensions: 5076
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 2
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)